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Daniel Tagge, MD
Board-certified family physician

How I think, what I teach, and what I am reading.

Everything on this side of the site is education. None of it is gated behind an email address, and none of it is a sales page.

It has four parts, and they are different kinds of writing. The framework is how I think and changes slowly. The essays are what I teach and are meant to stay true for years. The Report is dated: what I am reading now and what it changes. The glossary is reference. Start wherever your question is.

Four ways in

  1. 01Framework

    How I think.

    Health Optimization Medicine: the definition of health I work from, the method, and the seven systems I read. The durable reference. It changes slowly, and on purpose.

    Read the framework
  2. 02Essays

    What I teach.

    Evergreen writing on the biology, one topic at a time, organized by the seven systems and by a few short reading paths. Written for the people I treat.

    Browse the essays
  3. 03The Precision Health Report

    What I am reading now.

    Dated commentary on current research, issue by issue: what is new, what it means, and what it changes. Each issue is sourced and stays where it was published.

    Read the Report
  4. 04Glossary

    Reference.

    Plain definitions of the terms that appear across the site, so a word in a lab report or an essay never stops you.

    Open the glossary

The framework’s second level

Seven systems, one map.

Health Optimization Medicine organizes physiology into seven interacting systems. They are a map for interpretation, not a checklist of tests. Each has its own page.

How the seven fit together
  1. 01MetabolomicsA window on current chemistryThe small molecules your cells produce as they make energy, build, repair and clear waste. A view of what is happening biologically now, used when it adds to standard laboratory medicine.
  2. 02Evolutionary MedicineThe interpretive lensHuman physiology was shaped by an environment that differs from the one we live in. The clinical logic for reading the other six.
  3. 03ChronobiologyThe timekeeperHormones, immune function and metabolism run on circadian schedules. Disruption is common, often measurable, and often modifiable.
  4. 04ExposomicsThe environmental loadThe cumulative burden from diet, chemicals, metals, air and light. Some of it can be measured; it is assessed when a history suggests it is relevant.
  5. 05MitochondriaThe energy engineMitochondria produce most of the energy every other function depends on. Aspects of that function can be assessed, and lifestyle and clinical measures can support it.
  6. 06Gut-Immune HealthThe internal ecosystemThe gut houses a large share of the immune system and communicates with the rest of the body through what its microbes produce. Read as part of the whole picture.
  7. 07EpigeneticsThe dynamic gene regulatorEnvironment and behavior shape which genes are expressed without changing the sequence. Some patterns can be measured, and many respond to how a person lives.

Where to start

Three short paths.

Each path is a handful of essays in the order I would hand them to someone. Read one path and you will know how I think about that question.

Other ways in

Start with what you’re experiencing

If you are starting from how you feel rather than from a system, each symptom page says what it can mean, what should not be missed, and where in the framework, the pillars and the essays to read next.

Start with a symptom

By search

One search across the framework, the essays, the Report issues, the glossary and the symptom pages.

Search the site

By email

New issues delivered by email when published. Nothing on this side of the site requires an address to read.

Get new issues by email

When you want it applied to you

Reading the biology in general is not the same as reading it in you. That is the practice, and it begins with a conversation, not a purchase. How care works.